microbiology research topics for postgraduate

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Graduate Research Topics

Discovery, biosynthesis, and chemical ecology of microbial natural products; bioactivity and mode of action of antibiotics; biocatalyst development

Joseph A. Krzycki Biochemistry and molecular biology of methanogenic Archaea emphasizing methane formation and their genetic encoding of the novel amino acid pyrrolysine.

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Microbiology topics are some of the most researched ideas. This field entails the study of different microorganisms, ranging from eukaryotic fungi and single-celled organisms to cell-cluster organisms. When pursuing a microbiology course in a university or college, your educators will ask you to write academic papers on microbiology research topics.

Choosing the right microbiology topics to write about is essential because it determines the direction of your research and writing processes. Therefore, take your time to identify a topic you will be comfortable working with from the beginning to the end.

Top Microbiology Topics for Research

If looking for the top microbiology research paper topics, this list has some of the best ideas to explore. That’s because most people are searching for information related to these topics in microbiology.

• Bioterrorism- Bioweapons limit with technological developments
• Antibiotics resistance- A major limitation in medicine
• Extraterrestrial life- Existing life evidence in space
• Gene therapy- Gene therapy as a controversial biology topic
• Cloning- Latest developments in cloning research
• Antibacterial products-Latest discoveries explaining the possibility of antibacterial products effects on the immune system
• What is the future of microbiology research, both theoretically and technologically?
• Epidemics- Current disease control protocols and possible solutions
• Vaccines- Recent research about the effectiveness of vaccines like flue
• Food preservation methods- How technology enhances safe food preservation and consumption

These are brilliant microbiology project topics. However, you need time and effort to research any of these topics and come up with an awesome paper.

Current Topics in Microbiology and Immunology

Maybe you want to research and write about current topics in microbiology and immunology. That means you’re looking for topics that will enable you to explore recent information in this area. In that case, consider these microbiology topics in the news.

• Virus-like particle vaccines for protozoan parasites and respiratory viruses
• Quorum sensing and campylobacter biofilm formation in molecular mechanisms
• Campylobacter horizontal gene and natural competence transfer
• Murine investigation models for innate immune response and colonization resistance in campylobacter jejuni infections
• iBALT role in respiratory immunity
• Antiviral immunity for pyroptosis
• Damage to the sensing tissue by Myeloid c-Type Lectin receptors
• How antifungal drugs modify the cell wall
• Host cell’s death pathways manipulation by the Herpes Simplex virus
• Type II Secretion system structures in needle filaments
• RIP Kinase signaling outcomes during neuro-invasive infection by virus
• Innate immune system pathological and physiological functions of CARD 9 signaling
• The genetics of the Lassa virus
• Genital immunity’s memory lymphocyte- Tissue-resident memory T cells’ role
• Delivery and formulation technologies for the mRNA vaccines
• Peptide and protein nanocluster vaccines
• Reovirus’ cell killing- Consequences and mechanisms
• Leptospirosis reference lab’s role
• Hypoxia-inducible and hypoxia factors in stem cell maintenance among cancer patients
• Development of dengue vaccine

Pick any of these new research topics in microbiology if your goal is to work on recent information. Nevertheless, take your time reading recent literature in this field to come up with an awesome paper.

Interesting Topics in Microbiology

Perhaps, you’re looking for microbiology projects topics that most people will find interesting to read about. In that case, consider these interesting microbiology topics.

• Techniques and methodologies for future research about the virus
• Redox-active metabolite’s roles in microbial signaling
• The role and emergence of yeast as a baking industry’s preservative
• Host-pathogenic interactions study with a focus on redox and cellular metals
• Yeast non-conventional use in the wine-making industry
• Microbiota- What is the bifidobacterila’s role in the human gut?
• Virus role in vaccines development and improvement in third world countries
• Heath- Microbiology role in addressing antibiotic resistance
• Human microbial ecosystems study- Microbe interactions
• Impact and role of viruses in large animals’ health
• How bacteria in complex organisms respond to stress
• Cell to cell interaction and social behavior in bacteria interactions
• Norovirus cross-contamination investigation during service procedures in the food industry in fresh produce preparation
• Transfer rate determination in Salmonella sp. From nut butter to food materials
• Listeria monacytogenes comparative genomic analysis for survival within a food processing situation
• Thermal resistance and survival of desiccated Salmonella in dry and moist food processing environments
• Effective cleaning products for removing food matrix with B. Thuringiensis spores and B. Cereus
• Analysis of cleaning procedures’ effects on Bacillus spores
• How temperature affects viruses survival in vegetables and fruits
• How temperature and time combine to stimulate C. botulinum spores to germinate or produce a toxin

This category has some of the most interesting and easy microbiology research topics. However, take your time to research the topic you choose to write a paper that will impress your educator to award you the top grade.

Medical Microbiology Research Topics

Maybe you want to explore microbiology and human health topics. In that case, consider these medical-related microbiology paper topics.

• Probiotics- A study of their preparation
• How to prevent sickle cell anemia
• The growth of mold
• How fertilizes, polythene and manure affect the hypocotyl’s elongation rate
• How cinnamon and curry inhibit the growth of bacteria
• How oil spills affect microorganisms in the oceans
• Reproducing yeast in sugar substitutes
• Why vitamin c affects the rotting rate for fruits
• Effective toothbrush disinfecting methods
• Describe the spread of Ebola

Consider any of these microbiology research topics research paper if interested in something to do with medicine. However, take your time to identify good and authentic information sources before you start writing your paper. That’s because your educator will be interested in unique and relevant content.

Microbiology Research Topics for Undergraduates

Are you pursuing undergraduate studies in microbiology? If yes, you will find these microbiology research topics for college students interesting.

• Using polymerase chain reaction to diagnose infectious diseases
• Preliminary antimicrobial and phytochemical screening of coat and seed of citrus sinensis
• Microbiology effect on mining
• Human skin colonization by bacteria
• Sweet orange’s antibacterial activity on Escherichia coli and staphylococcus aureus isolated from wound infection
• The susceptibility pattern of bacteria to antibiotics
• Bush pear analysis and the oil project
• Spoilt avocado microbial examination- What it reveals
• Characterization and isolation of microorganisms from a stored pap
• CryoEM use in understanding pathogen resistance and transport
• Additive manufacture of skin-facing antimicrobial devices for surgery
• Oral bacteria’s role in cardiovascular disease
• Nutrient-mediated ‘Dual warhead’ antimicrobials’ delivery
• Induction mechanisms of the protective lung tissue memory cells in influenza
• The activity of eukaryotic, elucidating topoisomerase in homologous recombination
• Oral bacteria involvement in chronic periodontitis- Metabolomics investigation
• Effect of metal nanoparticles on the multi-species biofilm consortia- A metabolomics investigation
• How vaping or smoking affects the risk of CoV-2, SARS, and COVID-19 outcomes
• Soil contaminants risks on below and above ground eco-systems in urban areas
• Protective microbes- How to rebuild microbiota when treating AMR infection

This category also has some of the best microbiology topics for presentation. However, get ready to research any of these topics to write an impressive paper.

Hot Topics in Microbiology

Perhaps, you’re looking for the most interesting microbiology essay topics to research and write about. In that case, consider some of the ideas in this category.

• Shea butter’s microbiological analysis
• Research of tapeworms and their dangers
• Influenza spread in the world and its impact on the war
• Restriction-modification cellular microbiology
• Applied microbiology- Biofuels generation using microorganisms
• Microscope invention and its effect on microbiology knowledge
• Microbiology role in food industries and pharmaceutical
• How microbiology has helped in preventing life-threatening illnesses
• Bacterial polymer- A study of cyanophycin
• A study of the functionalities and properties of wetland bacteria
• Microbiological study of a commercial preparation of yogurts
• A study of bacteria that withstand antibiotics
• Human immunodeficiency virus diagnosis- How it’s done
• A study of plasmodium species correlation
• A study of onions’ microorganisms
• An investigation of starch fermentation, specificities, and activities of its enzymes
• Listeria growth and survival in freshly cut vegetables
• Low moisture food inoculation protocols
• Survival and growth of Salmonella during partially sprouted products processing and chia powders
• Environmental organisms’ risk assessment and the importance of better control and knowledge

This category also has some of the best food microbiology topics. Nevertheless, students should be ready to spend time and effort researching any of these ideas before writing. That’s because educators expect them to present fresh and relevant information in their papers.

Learners have many topics or ideas to consider when researching and writing academic papers. However, every student should look for an interesting topic they are comfortable researching and writing about. That’s because writing a research paper or essay takes time. Choosing a boring topic means a learner will spend their time working on something they’re not interested in. And this can reflect on the quality of their paper. Thus, their grade will suffer.

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177 Captivating Microbiology Research Topics For Your Paper

Selecting microbiology research topics is the first step in the process of completing academic studies. Microbiology is among the fields that experts are constantly actively researching. It deals with microorganisms’ study, from single-cell organisms to eukaryotic fungi. When pursuing a course in microbiology, educators ask learners to write academic papers on varied topics. It is not easy to write a research paper for a high grade. However, choosing the best microbiology topics is not that simple due to the vast scope of this study field. But the issue that a college or university student selects dictates the direction of their project. If struggling to choose the best microbiology topics for research paper, this list should inspire you. 

Top Microbiology Research Paper Topics

Perhaps, you want to write research papers on some of the topics that most people will be interested in reading. In that case, consider these microbiology topics for research paper projects.

• Effects of microwave radiation on different organisms
• Impacts of glucose on cut flowers’ longevity
• Modern food preservation- Impacts of technology on food conservation and consumption
• The effectiveness of recent vaccines
• Possible solutions and disease control
• Microbiology research future- Technological and theoretical developments
• Antibacterial products- Recent discoveries in antibacterial products affecting the immune system
• Latest cloning research developments
• Controversies in gene therapy
• Evidence of extraterrestrial life
• Antibiotics residence as a medicine limitation
• Bio-weapons and technological limitations

Any of these ideas is an excellent title for a research paper. However, extensive research is necessary to develop a quality paper.

Medical Microbiology Research Paper Topics

Perhaps, you’re interested in medical microbiology. In that case, consider these interesting topics in medical microbiology.

• Probiotics study and preparation
• How to prevent sickle cell anemia
• Analyzing the growth of mold
• The ability of cinnamon and curry to hinder bacterial growth
• How manure, polythene, and fertilizers affect the rate of hypocotyl elongation
• How oil spills affect ocean organisms
• Toxicity testing in marine pollutants with daphnia
• Reproduction of yeast in sugar substitutes
• Tendrils thigmotropism
• The effect of light on yeast
• Mold growth in cheese
• Dog drool and germs
• In which ground beef is bacteria level low?
• Isolating staphylococcus aurous from pasteurized and raw milk
• How garlic affects bacteria
• Effective ways to disinfect a toothbrush
• Investigating the spread of infectious diseases like Ebola
• Effects of vitamin C on fruits rotting rate

These are exciting topics in microbiology and human health. Nevertheless, take your time to research any of these ideas to develop a winning paper.

Microbiology Research Topics for Undergraduates

Maybe you’re pursuing an undergraduate course in microbiology. That means your educator will ask you to write a research paper at some point. Here are brilliant microbiology ideas to consider for your essays.

• Rebuilding microbiota during AMR infection treatment
• Risks of soil contaminants on above and below-ground ecosystems
• Effects of smoking or vaping on COVID-19, SARS, and Cov-2 results
• How metal nanoparticles affect multi-species biofilm consortia
• The involvement of oral bacteria in chronic periodontitis
• The eukaryotic activity elucidating topoisomerase in the recombination of homologous
• Protective lung tissue memory’s induction mechanisms in influenza
• The role of oral bacteria in cardiovascular disease
• Dual warhead antimicrobials in nutrient-mediated delivery
• Skin-facing antimicrobial devices in surgery during additive manufacture
• The use of CryoEM in pathogen transport and resistance study
• Isolation and characterization of microorganisms
• Microbial examination in spoilt avocado- What does it reveal?
• Polymerase chain reaction used in the diagnosis of infectious diseases
• Phytochemical and antimicrobial screening of seed and coat of Citrus Sinensis
• Effects of microbiology on mining
• How bacteria colonize the human skin
• Antibacterial activity of sweet orange on staphylococcus aureus and Escherichia coli from wound infection
• Bacteria’s susceptibility to antibiotics
• The oil project and bush pear analysis

Pick any of these ideas for your research paper if pursuing an undergraduate degree. Nevertheless, prepare to research the title you choose to develop a winning piece.

PhD Research Topics in Microbiology

A microbiology PhD should prepare the learner to select medical, dental, or health studies to venture into biotechnology or pharmaceutical fields. Here are exciting thesis topics for microbiology students.

• Microbial biofilms- Fungal and bacteria pathogens in environmental substrates and biomaterials
• Bacterial cell fate manipulation- Signal transduction and surface sensing role
• Salmonella typhi susceptibilities to hot aqueous extract from Hibiscus sabdariffa and antibiotics
• Toxins characterization and isolation using Cronobacter species
• Bacillus Thuringiensis and Rhizobium etli biocontrol potential
• Engineered Saccharomyces cerevisiae strain construction to improve the production of whole-cell biocatalytic of melibiose
• Cyclic utilization in biotransformation
• Electro-activated solutions’ antibacterial activity
• Understanding the Swine flu pandemic from a microbiology perspective
• Investigating typhoid fever and risk factors in kids

Please choose a topic in this category and use it as the basis of your PhD. Nevertheless, prepare to invest time and resources in your research to develop a winning paper.

Microbiology Research Topics for College Students

Are you a college student looking for a microbiology paper topic? If yes, here are sample topics to consider for your paper.

• Evaluating changes in Ebola
• Understanding Pfiesteria piscicida subtle health effects on the worldwide population
• Has the world lost the battle with malaria?
• Horizontal genetic exchange role in the bacterial mutation
• Understanding genetic engineering applications in the food supply chain
• Analyzing genetic engineering applications in antibodies to work as enzymes
• Investigating generic allegiances- Peanut allergies case study
• Alternative targets development for vaccines
• Prevalence and history of HIV in Africa
• Biotechnology potential in smart tech
• Endolithic bacteria study in low-temperature places- Making life existence case on mars
• Understanding nitric oxide role in the immune system
• Understanding the development of superantigens and their applications
• Evaluating autoimmune disease patterns in the last decade
• How different carbon sources affect antimicrobial-producing Bacillus Species
• Antimicrobial susceptibility and prevalence of Gram-Negative Bacterial in urine
• Possible control and prevention of intestinal Schistosomiasis
• Damage and safety of water
• The antibacterial activity of medicated soaps
• Yogurt’s microbial contamination

Please select any of the ideas in this list and then develop it via extensive research to write a fantastic paper.

New Research Topics in Microbiology

Maybe you’re interested in the newest idea for research. If so, consider these latest research topics in microbiology.

• Dengue fever vaccine development
• Hypoxia and hypoxia-inducible factors in cancer patients’ stem cell maintenance
• The laboratory role of Leptospirosis reference
• The mechanisms and consequences of Reovorus cell killing
• Protein and peptide nanocluster vaccines
• Formulation and delivery techniques for mRNA vaccines
• Memory lymphocyte in genital immunity- T cells’ role in tissue-resident memory
• Investigating the Lassa virus genetics
• Physiological and pathological functions in innate immune systems of CARD 9 signaling
• Signaling outcomes in RIP Kinase during neuro-invasive virus infection
• Structures of type II secretion system in needle filaments
• The manipulation of death pathways in hot cells by the Herpes Simplex virus
• The modification of the cell wall by antifungal drugs
• Sensing tissue damage by Myeloid c-type lectin receptors
• Virus-like particle immunization for respiratory viruses and protozoan parasites
• Campylobacter biofilm and quorum sensing in molecular mechanisms
• Natural competence transfer and campylobacter horizontal gene
• Investigating marine models for innate immune response and resistance colonization in campylobacter jejuni infections
• The role of iBALT in respiratory immunity
• Pyroptosis antiviral immunity

These are some of the latest topics to consider for microbiology research papers. However, each of these ideas requires extensive research to write an essay that will earn you the top grade.

Hot Research Paper Topics in Microbiology

Do you want to write a research paper on one of the hottest topics? If yes, consider these ideas for your project.

• Risk assessment for environmental organisms and the essence of knowledge and control
• Growth and survival of Salmonella during the processing of partially sprouted products and chia powders
• Innoculation protocols for low moisture foods
• Listeria survival and growth in newly cut vegetables
• Investigating starch specificities, fermentation, and enzyme activities
• Onions’ microorganisms study
• Studying the correlation of Plasmodium species
• How to diagnose human immunodeficiency virus
• Investigating bacteria that can withstand antibiotics
• Yogurts’ microbiological study during commercial preparation
• Wetland bacterial properties and functionalities
• Cyanophycin study- A bacterial polymer
• Microbiology and its role in the prevention of life-threatening illnesses
• Microbial analysis of Shea butter
• Tapeworms’ research- What are their dangers?
• The spread of influenza in the world- How it affected wars?
• Restriction-modification in cellular microbiology
• Microscope invention- How it improved microbiology knowledge
• Applied microbiology- Generation of biofuels using microorganisms
• Role of microbiology in pharmaceutical and food industries

Select and work with any of these great topics to impress the educator to award you the top grade in your class.

Environmental and Marine Microbiology Research Topics

Maybe you love researching and writing about ecological and marine microbiology. If so, consider these topic ideas for your research papers.

• Wastewater and water treatment- What are the target microorganisms?
• Marginal water reclamation and treatment
• Greenhouse gases mitigation and biofiltration
• Greenhouse gases sources
• Biowaste nutrient recovery
• Bio-remediation of water bodies and soils in arid environments
• Bio-methane production using dry climates animal wastes
• Desert rocks microbial inhabitants
• The role of bacterial diversity in the maintenance of functional ecosystems in arid areas
• How rain events affect microbial activity, abundance, and diversity
• Cycling nitrogen in dry soils
• Desert soil crust role in nutrient cycling
• Interrelationships between soil bacteria and plants and their effects on biochemical cycling
• Microorganisms in phyllosphere and rhizosphere in desert plants
• Characterization of marine viruses
• Marine biofouling microbial aspects

Students can work on these topics by researching them carefully before writing academic papers.

Food Microbiology Research Topics

If interested in food microbiology, this category has some of the best ideas for you to explore.

• How temperature affects viruses’ survival in vegetables and food to help in virus contamination comprehension
• Evaluating process water usage as the marker for determining freshly-cut greens’ contamination status
• Investigating the initial contamination, time, temperature, sanitizing rinses, indigenous microflora, and package atmosphere on E.coli’s behavior in leafy greens
• How temperature and time combine to stimulate the germination of spores in c. botulinum
• How cleaning procedures and physical augmentation remove bacillus spores in food matrices
• Norovirus and cross-contamination in the foodservice procures for preparing fresh produce
• Examining virus and abiotic surfaces in the food processing and service sectors
• How to improve sprout food safety
• Growth and survival of Listeria in freshly-cut vegetables
• Nonthermal and thermal resistance of Shiga-Toxin producing Coli and Salmonella Enterica in low-moisture foods
• How water and temperature activity affect Salmonella during storage and drying of Botanical products
• Norovirus surrogates mitigation in berries using minimal high hydrostatic pressure and freeze-drying treatment
• Bacterial pathogen mechanisms of internalization into freshly-cut fruits
• Low moisture foods inoculation protocols

Work on any of these topics if interested in a project that involves exploring food and microbiology ideas.

Immunology Microbiology Research Topics

Perhaps, you want to write a research paper on an immunology and microbiology topic. If so, consider these brilliant ideas for your essay.

• Human diseases and bacteria
• Cell biology and bacterial physiology
• Human health and microbiology
• Investigating parasite effects on human healthy
• Human diseases and viruses
• Genetics of microorganisms
• Studying eukaryotic pathogens and diseases
• Molecular microbiology and experimental approaches
• Investigating different parasitism mechanisms
• What is advanced immunology?

Select any topic in this category and perform extensive research to provide valid and relevant information that will impress the educator to award you the best grade.

Easy Microbiology Research Topics

Maybe you want a topic you’ll have an easy time working on and writing a quality paper. If so, consider these ideas for your research paper.

• How time and temperature stimulate toxin production by C. botulinum spores
• Effects of temperature on virus survival in fruits and vegetables
• Methodology and techniques for future virus studies
• The role of Redox-active metabolites in microbial signaling
• The emergence and essence of yeast in preservatives within the baking industry
• Non-conventional uses of yeast in the wine-manufacturing sector
• Microbiota- The role of bifidobacteria’s role in the human body
• Microbes interactions- The study of human microbial ecosystems
• The impact of viruses on the health of large animals
• How bacterial interactions affect cell social behavior and interaction
• How cleaning procedures impact Bacillus spores
• Desiccated Salmonella’s survival in moist and dry food processing places
• A comparative analysis of Listeria monacytogenes survival in the food manufacturing environments
• What determines the transfer rate for Salmonella sp. From butter to foods?
• Cross-contamination investigation of norovirus during service procedures within the food industry
• How human fungal pathogen’s genetic variation cause phenotypic diversity that affects diseases
• How microbiology research has helped humans in preventing life-threatening diseases

Any of these ideas can be a brilliant topic for a research paper. However, careful research and dedication are necessary to write a top-notch essay.

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Lessons and Courses on Microbiology

MICROBIOLOGY PROJECT TOPICS

Below are some PROJECT TOPICS for your undergraduate and postgraduate (M.Sc. & Ph.D.) research studies. These project topics are only “suggestive in nature. This implies that they can be used as they are, or they can be modified and used as you so deem fit.

@ www.MicrobiologyClass.net we are interested in the academic- and self-development of our users, and that is why we have taken it upon ourselves to update on these topics from time to time, so that our users will always have free access to the project topics of their choice.

In case you have any project topic that you will like us to include to the list, please feel free to submit your suggested project topic through our email below. Our editorial team members will look at it, and add them to the list. You can also submit such “suggested project topic” through: [email protected]

• Physiology and ecology of the neonatal gut microbiota
• Biodegradable Polymer Degradation in Compost Environments
• The Influence of Invasive Species on Host-Associated Microbiomes 
• Impacts of bacterial associated ectomycorrhizal fungi on forest fungal and tree growth 
• Emerging pollutant transformation and reactive oxygen species formation by oxygenase enzymes in different microbiomes
• Survival and resuscitation mechanisms of desert soil bacteria
• The effect of seasonal oxygen fluctuations on aquatic microbiomes
• Microbiome-Enhanced Silicate Weathering
• Comparative Analysis of Gut Microbiomes in Chinchillas and mice for pathogen research
• Characterization of Probiotic Properties of Limosilactobacillus fermentum
• Whole-Genome Analysis of  Lactobacillus johnsonii
• Effect of flouroquinolones and aminoglycosides mixtures on soil bacterial activity
• Evolution and spread of antibiotic resistant bacteria on antimicrobial surfaces in hospitals
• Determination of the single and combined effects of antibiotics on soil bacterial and fungal communities
• Characterization of PVL-positive MRSA isolates.
• Effect of Lactiplantibacillus plantarum strains on the intestinal microbiome.
• Prevalence of Enterotoxigenic Escherichia coli in children and adults.
• Isolation and characterization of entomopathogenic fungi from soil.
• Genomic analysis of hydrocarbon oxidizing sulphur bacteria.
• Investigation of the biodegrading potentials of Fervidobacteriumpennivorans .
• Effect of calcium on the genetic makeup of Gemmatimonas phototrophica .
• Modulation of Mycorrhizal colonization for improved food production.
• Isolation and characterization of novel antimicrobial compounds from endophytes.
• Isolation and characterization of novel antimicrobial compounds from lichens.
• Monitoring of wastewaters for the prevalence of SARS-CoV-2 to mitigate COVID-19 spread.
• Metagenomics to unravel novel antimicrobial resistance genes in hospital environment.
• Determination of quorum sensing and biofilm-forming capability in Pseudomonas aeruginosa isolated from door handles, sinks, beddings and floor of hospitals 
• Occurrence and serotyping of Salmonella species from blood samples of in- and out-patients
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Acinetobacter baumannii
• Prevalence and Plasmid Profile of Fluoroquinolone – Resistant Staphylococcus aureus (FQRSA) isolated from clinical samples
• Bacteriological and Physicochemical Parameters of Selected Borehole Water Sources
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Aeromonas hydrophila
• Preliminary Studies on the Antibacterial Activities of Leaf Extracts of Azadirachta indica and Psidium guajava on Methicillin and Vancomycin Resistant Staphylococcus aureus .
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Salmonella and Shigella spcecies
• Molecular Detection of Panton-Valentine Leukocidin (PVL) Toxins in Clinical Isolates of Staphylococcus aureus
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Candida auris
• Prevalence, antibiogram and Plasmid Profile of Fluoroquinolone – Resistant Staphylococcus aureus (FQRSA) isolated from poultry and abattoir samples
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Candida albicans
• Evaluation of the antibacterial activity of Parkia biglobosa, Hymenocardia acida and Zanthoxylum zanthoxyloides extracts on pathogenic Gram negative and Gram positive bacteria
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Vibrio cholerae
• Detection and antibiogram of constitutive- and inducible-clindamycin-resistance in clinical isolates of Staphylococcus aureus
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Enterococcus faecalis
• Antibacterial Activity of Adenia Cissampeloides Plant Extracts on some selected Gram positive and Gram negative bacteria
• Evaluation of the Efficacy, Quality and Safety of Hepatitis B Vaccines stored in cold-chain systems
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Listeria monocytogenes
• Phytochemical and Antimicrobial analysis of hulls and nuts of Tetracarpidium conophorum (Ukpa) on selected Gram positive and Gram negative bacteria
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Mycobacterium species
• Prevalence, antibiogram and PCR detection of the virulence-associated genes of Escherichia coli
• In Vitro Susceptibility Test of Different Clinical bacterial Isolates against first generation cephalosporins
• Determination and isolation  of the metabolites of endophytic Colletotrichum gloeosporioides isolated from leaves of Carica papaya
• Isolation and characterization of bacteria and fungi associated with the biodegradation of municipal solid waste matter
• In Vitro Susceptibility Test of Different Clinical bacterial Isolates against second generation cephalosporins
• Isolation, antibiogram and characterization of vancomycin-resistant Staphylococcus aureus from clinical bacterial isolates
• In Vitro Susceptibility Test of Different Clinical bacterial Isolates against third generation cephalosporins
• Determination of Bioethanol Production from Corncob Hydrolysed by Cellulase of Aspergillus niger Using Zymomonas mobilis and Saccharomyces cerevisiae
• In Vitro Susceptibility Test of Different Clinical bacterial Isolates against fourth generation cephalosporins
• In Vitro Susceptibility Test of Different Clinical bacterial Isolates against fifth generation cephalosporins
• Evaluation of the Efficacy, Quality and Safety of Hepatitis B Vaccines sold in the open market
• In Vitro Susceptibility Test of Different Clinical fungal Isolates against ketoconazole and nystatin
• Phenotypic detection of extended spectrum beta lactamase (ESBL)-producing Escherichia coli isolates from hospital samples
• Phenotypic detection of metallo beta lactamase (MBL)-producing Escherichia coli isolates from hospital samples
• Phenotypic detection of AmpC enzyme producing Escherichia coli isolates from hospital samples
• Phenotypic detection of ESBL producing Klebsiella pneumoniae isolates from hospital samples
• Phenotypic detection of metallo beta lactamase (MBL)-producing Klebsiella pneumoniae isolates from hospital samples
• Phenotypic detection of AmpC enzyme producing Klebsiella pneumoniae isolates from hospital samples
• Phenotypic detection of ESBL producing Pseudomonas aeruginosa isolates from hospital samples
• Phenotypic detection of metallo beta lactamase (MBL)-producing Pseudomonas aeruginosa isolates from hospital samples
• Phenotypic detection of AmpC enzyme producing Pseudomonas aeruginosa isolates from hospital samples
• Isolation of Bacillus species with antibiotic-producing ability from soil samples
• Detection of methicillin resistant Staphylococcus aureus (MRSA)isolates from clinical samples
• Phenotypic detection of vancomycin resistant Enterococcus species from clinical samples
• Detection of methicillin resistant Staphylococcus aureus (MRSA) isolates from pig dung’s
• Detection of methicillin resistant Staphylococcus aureus (MRSA) isolates from cow dung’s
• Prevalence of Schistosoma haematobium infection in a primary school
• Prevalence of Schistosoma bovis infection in abattoir houses
• Prevalence of Schistosoma bovis infection in intestinal tract of slaughtered animals
• Evolution of biocide resistance in clinical isolates of Pseudomonas aeruginosa
• PCR detection of virulence-associated genes in multidrug resistant clinical isolates of Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli
• Molecular characterization of antibiotic resistant genes in methicillin resistant Staphylococcus aureus (MRSA) isolates of clinical origin
• PCR determination of panton valentine leukocidin genes in methicillin resistant Staphylococcus aureus (MRSA) isolates
• Comparison of Cefoxitin and Oxacillin Disk Diffusion Methods for Detection of mecA-Mediated Resistance in Staphylococcus aureus
• PCR detection of mecA gene in methicillin resistant Staphylococcus aureus (MRSA) isolates
• Antimicrobial susceptibility profile of methicillin resistant coagulase negative staphylococci (CoNS) strains of hospital origin
• Antibiogram of Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli isolates recovered from ready to eat food samples
• Susceptibility profile of Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli isolates recovered from Zobo drink samples
• Antimicrobial susceptibility profile of Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli isolates recovered from Soya milk drink samples
• Prevalence of Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli isolates in marketed sachet and bottled waters
• Phenotypic Detection of Methicillin Resistance in Staphylococcus aureus by Disk Diffusion Testing and Etest
• Prevalence of methicillin resistant Staphylococcus aureus (MRSA) isolates in pig farms
• Prevalence and antimicrobial susceptibility profile of methicillin resistant Staphylococcus aureus (MRSA) isolates from cattle farms
• Detection and prevalence of methicillin resistant Staphylococcus aureus (MRSA) isolates from goat farms
• Antimicrobial susceptibility patterns and occurrence of methicillin resistant Staphylococcus aureus (MRSA) isolates in poultry farms
• Antimicrobial susceptibility profile of Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli isolates recovered from faecal samples of poultry birds
• Antimicrobial susceptibility profile of bacterial pathogens recovered from free-range birds or fowls
• Isolation of Saccharomyces cerevisiae from fresh and soured palm wine marketed in local and urban markets
• Determination of the ethanolic and methanolic extracts of the root, leaves and stem of Azadirachta indica on Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli clinical isolates 
• Determination of the ethanolic and methanolic extracts of the root, leaves and stem of Garcinia kola on Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli clinical isolates 
• Determination of the ethanolic and methanolic extracts of the root, leaves and stem of Carica papaya on Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli clinical isolates 
• Determination of the ethanolic and methanolic extracts of the root, leaves and stem of Zingiber officinale on Pseudomonas aeruginosa, Klebsiella pneumoniae and Escherichia coli clinical isolates 
• Investigation of Schistosoma species in Pond Water Snails
• Detection of Plasmid Borne Extended Spectrum Beta Lactamase Enzymes from Blood and Urine Isolates of Gram – Negative Bacteria
• Detection of Klebsiella pneumoniae isolates Producing CTX-M-15 Extended Spectrum Beta Lactamases
• Detection of extended-spectrum β-lactamase-producing Escherichia coli isolates from suspected community acquired urinary tract infections
• Doripenem and ertapenem resistance amongst ESBL positive and AmpC positive Escherichia coli and Klebsiella pneumoniae clinical isolates.
• Detection of extended-Spectrum Βeta-Lactamase – Producing Escherichia Coli Strains of Poultry Origin
• Detection of extended-Spectrum Βeta-Lactamase – Producing Escherichia Coli Strains of abattoir Origin
• Microbiological investigation of Escherichia coli isolates from cloacal and feacal swabs of broiler chickens for AmpC enzymes and metallo beta lactamase enzymes
• Frequency and antibiogram of uropathogens isolated from Urine Samples of HIV Infected Patients
• Inhibitory effects of neem and Bitter kola leaves on selected pathogenic bacteria and fungi
• Detection of Extended Spectrum β-Lactamase Enzymes from Otitis Media Bacteria Pathogens.
• Cloacal faecal carriage and occurrence of antibiotic resistant Escherichia coli, Klebsiella pneumoniae and Pseudomonas aeruginosa in chicken grown with and without antibiotic supplemented feed
• Evaluation of antibacterial activities of some Nigerian medicinal plants against some Gram negative resistant bacteria pathogens
• Detection of ESBL-producing Gram negative bacteria using Matrix-Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry.
• Prevalence and antibiogram of Aeromonas hydrophila isolated from water samples
• Determination of the Quality of Commercial Antibacterial Discs Available in Nigerian market
• Determination of the Medicinal Efficacy of Acetone, Aqueous, Methanol and Ethanol Crude Extracts of Mangifera indica Leaf
• Phytochemical analysis and Antimicrobial Activity of Ethanolic and Methanolic Stem and Root Extracts of Cnestis ferruginea on Multidrug Resistant Bacteria of clinical origin
• Prevalence and antibiogram of Salmonella species, Shigella species and Staphylococcus aureus in retail meats
• Determination of the Microbial Contamination and prevalence of multidrug resistant bacteria of Ready-to-Eat Fried Chicken Meat
• Antimicrobial susceptibility profile of Staphylococcus aureus from Healthy School Pupils
• Antibiogram of Streptococcus pneumoniae Isolated from the Nasopharyngeal Mucosa of primary school children
• Antifungal and antibacterial activities of Ocimum gratissimum and Gongronema latifolium leaves on Colletotrichum species
• Phytochemical analysis and Antibacterial activity of Crude Extracts from Leaves of Wonderful Kola on some selected Gram positive and Gram negative bacteria
• Antibiotic sensitivity profiles of biofilm-producing bacterial isolates from clinical and water samples
• Metagenomics to unravel novel AMR in food chain.

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Six Key Topics in Microbiology: 2019

Read an essential collection of papers showcasing high-quality content from across the five FEMS Journals, which together provide an overview of current research trends in microbiology. Follow the topic area links below for access to articles:

• Antimicrobial Resistance

Environmental Microbiology

Pathogenicity & virulence, biotechnology & synthetic biology, microbiomes, food microbiology, antimicrobial resistance.

Effects of sample preservation and DNA extraction on enumeration of antibiotic resistance genes in wastewater An-Dong Li, Jacob W Metch, Yulin Wang, Emily Garner, An Ni Zhang, Maria V Riquelme, Peter J Vikesland, Amy Pruden, Tong Zhang FEMS Microbilogy Ecology , DOI: 10.1093/femsec/fix189 First published online: 1 February 2018

Occurrence and abundance of antibiotic resistance genes in agricultural soil receiving dairy manure Chad W McKinney, Robert S Dungan, Amber Moore, April B Leytem FEMS Microbiology Ecology , DOI: 10.1093/femsec/fiy010; First published online: 1 March 2018

Environmental factors influencing the development and spread of antibiotic resistance Johan Bengtsson-Palme, Erik Kristiansson, D G Joakim Larsson FEMS Microbiology Reviews , DOI: 10.1093/femsre/fux053 First published online: 01 January 2018

Comparative genomic and transcriptomic analyses unveil novel features of azole resistnce and adaptation to the human host in Candida glabrata Sara Barbosa Salazar, Can Wang, Martin Münsterkötter, Michiyo Okamoto, Azusa Takahashi-Nakaguchi, Hiroji Chibana, Maria Manuel Lopes, Ulrich Güldener, Geraldine Butler, Nuno Pereira Mira FEMS Yeast Research , DOI: 10.1093/femsyr/fox079 First published online: 01 February 2018

How proteases from Enterococcus faecalis contribute to its resistance to short a-helical antimicrobial peptides Ondrej Nešuta, Miloš Budešínský, Romana Hadravová, Lenka Monincová, Jana Humpolicková, Václav Cerovský FEMS Pathogens and Disease , DOI: 10.1093/femspd/ftx091 First published online: 29 September 2017

Ice algal bloom development on the surface of the Greenland Ice Sheet C J Williamson, A M Anesio, J Cook, A Tedstone, E Poniecka, A Holland, D Fagan, M Tranter, M L Yallop FEMS Microbiology Ecology DOI: 10.1093/femsec/fiy025 First published online: 01 March 2018

Investigation of viable taxa in the deep terrestrial biosphere suggests high rates of nutrient recycling Margarita Lopez-Fernandez, Elias Broman, Stephanie Turner, Xiaofen Wu, Stefan Bertilsson, Mark Dopson FEMS Microbiology Ecology , DOI: 10.1093/femsec/fiy121 First published online: 01 August 2018

Soil Protists: a fertile frontier in soil biology research Stefan Geisen, Edward A D Mitchell, Sina Adl, Michael Bonkowski, Micah Dunthorn, Flemming Ekelund, Leonardo D Fernández, Alexandre Jousset, Valentyna Krashevska, David Singer, Frederick W Spiegel, Julia Walochnik, Enrique Lara FEMS Microbiology Reviews , DOI: 10.1093/femsre/fuy006 First published online: 01 May 2018

Vector-borne diseases and climate change: a European perspective Jan C Semenza, Jonathan E Suk FEMS Microbiology Letters , DOI: 10.1093/femsle/fnx244 First published online: 01 January 2018

Beyond nitrogen metabolism: nitric oxide, cyclic-di- GMP and bacterial biofilms Serena Rinaldo, Giorgio Giardina, Federico Mantoni, Alessio Paone, Francesca Cutruzzolàr FEMS Microbiology Letters , DOI: 10.1093/femsle/fny029 First published online: 01 March 2018

Bacterial-fungal interactions: ecology, mechanisms and challenges Aurélie Deveau, Gregory Bonito, Jessie Uehling, Mathieu Paoletti, Matthias Becker, Saskia Bindschedler, Stéphane Hacquard, Vincent Hervé, Jessy Labbé, Olga A Lastovetsky, Sophie Mieszkin, Larry J Millet, Balázs Vajna, Pilar Junier, Paola Bonfante, Bastiaan P Krom, Stefan Olsson, Jan Dirk van Elsas, Lukas Y Wick FEMS Microbiology Reviews , DOI: 10.1093/femsre/fuy008 First published online: 01 May 2018

The human cytomegalovirus terminase complex as an antiviral target: a close-up view G Ligat, R Cazal, S Hantz, S Alain; FEMS Microbiology Reviews , DOI: 10.1093/femsre/fuy004 First published online: 01 March 2018

Molecular variability and genetic structure of white spot syndrome virus strains from northwest Mexico based on the analysis of genomes Delia Patricia Parrilla-Taylor, Norberto Vibanco-Pérez, Maria de Jesús Durán-Avelar, Bruno Gomez- Gil, Raúl Llera-Herrera, Ricardo Vázquez-Juárez FEMS Microbiology Letters , DOI: 10.1093/femsle/fny216 First published online: 01 October 2018

The first known virus isolates from Antarctic sea ice have complex infection patterns Anne-Mari Luhtanen, Eeva Eronen-Rasimus, Hanna M Oksanen, Jean-Louis Tison, Bruno Delille, Gerhard S Dieckmann, Janne-Markus Rintala, Dennis H Bamford FEMS Microbiology Ecology , DOI: 10.1093/femsec/fiy028 First published online: 1 April 2018

Host-pathogen redox dynamics modulate Mycobacterium tuberculosis pathogenesis Hayden T Pacl, Vineel P Reddy, Vikram Saini, Krishna C Chinta, Adrie J C Steyn FEMS Pathogens and Disease , DOI: 10.1093/femspd/fty036 First published online: 01 July 2018

The CRISPR-Cas system in Enterobacteriaceae Liliana Medina-Aparicio, Sonia Dávila, Javier E Rebollar-Flores, Edmundo Calva, Ismael Hernández- Lucas FEMS Pathogens and Disease , DOI: 10.1093/femspd/fty002 First published online: 01 February 2018

Mycobacterial biomaterials and resources for researchers Manzour Hernando Hazbón, Leen Rigouts, Marco Schito, Matthew Ezewudo, Takuji Kudo, Takashi Itoh, Moriya Ohkuma, Katalin Kiss, Linhuan Wu, Juncai Ma, Moriyuki Hamada, Michael Strong, Max Salfinger ,Charles L Daley, Jerry A Nick, Jung-Sook Lee, Nalin Rastogi, David Couvin, Raquel Hurtado-Ortiz, Chantal Bizet, Anita Suresh, Timothy Rodwell, Audrey Albertini, Karen A Lacourciere, Ana Deheer- Graham, Sarah Alexander, Julie E Russell, Rebecca Bradford, Marco A Riojas FEMS Pathogens and Disease , DOI: 10.1093/femspd/fty042 First published online: 01 June 2018

Yeast 2.0- connecting the dots in the construction of the world's first functional synthetic eukaryotic genome I S Pretorius, J D Boeke FEMS Yeast Research , DOI: 10.1093/femsyr/foy032 First published online: 01 June 2018

Laboratory evolution for forced glucose-xylose co-consumption enables identification of mutations that improve mixed-sugar fermentation by xylose-fermenting Saccharomyces cerevisiae Ioannis Papapetridis, Maarten D Verhoeven, Sanne J Wiersma, Maaike Goudriaan, Antonius J A van Maris, Jack T Pronk FEMS Yeast Research , DOI: 10.1093/femsyr/foy056 First published online:01 September 2018

State of the art in eukaryotic nitrogenase engineering Stefan Burén, Luis M Rubio FEMS Microbiology Letters , DOI: 10.1093/femsle/fnx274 First published online: 01 January 2018

Whole-genome sequencing based characterization of antimicrobial resistance in Enterococcus Gregory H Tyson, Jonathan L Sabo, Crystal Rice-Trujillo, Jacqueline Hernandez, Patrick F McDermott FEMS Pathogens and Disease , DOI: 10.1093/femspd/fty018 First published online: 01 March 2018

Biofilm growth and control in cooling water industrial systems F Di Pippo, L Di Gregorio, R Congestri, V Tandoi, S Rossetti FEMS Microbiology Ecology , DOI: 10.1093/femsec/fiy044 First published online: 01 May 2018

Novel sequencing technologies to support industrial biotechnology Adalberto Costessi, Bartholomeus van den Bogert, Ali May, Emiel Ver Loren van Themaat, Johannes A Roubos, Marc A B Kolkman, Derek Butler, Walter Pirovano FEMS Microbiology Letters , DOI: 10.1093/femsle/fny103 First published online: 01 August 2018

Influenza A virus subtype H9N2 infection disrupts the composition of intestinal microbiota of chickens Alexander Yitbarek, J Scott Weese, Tamiru Negash Alkie, John Parkinson, Shayan Sharif FEMS Microbiology Ecology , DOI: 10.1093/femsec/fix165 First published online: 01 January 2018

Pathogens, microbiome and the host: emergence of the ecological Koch's postulates Pascale Vonaesch, Mark Anderson, Philippe J Sansonetti FEMS Microbiology Reviews , DOI: 10.1093/femsre/fuy003 First published online: 09 January 2018

Talk to your gut: the oral-gut microbiome axis and its immunomodulatory role in the etiology of rheumatoid arthritis Marines du Teil Espina, Giorgio Gabarrini, Hermie J M Harmsen, Johanna Westra, Arie Jan van Winkelhoff, Jan Maarten van Dijl FEMS Microbiology Reviews , DOI: 10.1093/femsre/fuy035 First published online: 01 January 2019

Shift of hindgut microbiota and microbial short chain fatty acids profiles in dairy calves from birth to pre-weaning Yang Song, Nilusha Malmuthuge, Michael A Steele, Le Luo Guan FEMS Microbiology Ecology , DOI: 10.1093/femsec/fix179 First published online: 01 March 2018

The Smallest Intestine (TSI)- a low volume in vitro model of the small intenstine with increased throughput T Cieplak, M Wiese, S Nielsen, T Van de Wiele, F van den Berg, D S Nielsen FEMS Microbiology Letters , DOI: 10.1093/femsle/fny231 First published online: 01 November 2018

Saccharomyces cerevisiae variety diastaticus friend or foe? - spoilage potential and brewing ability of different Saccharomyces cerevisiae variety diastaticus yeast isolates by genetic, phenotypic and physiological characterization Tim Meier-Dörnberg, Oliver Ingo Kory, Fritz Jacob, Maximilian Michel, Mathias Hutzler FEMS Yeast Research , DOI: 10.1093/femsyr/foy023 First published online: 01 June 2018

Trans-regulation and localization of orthologous maltose transporters in the interspecies lager yeast hybrid Virve Vidgren, Brian Gibson FEMS Yeast Research , DOI: 10.1093/femsyr/foy065 First published online: 01 September 2018

Fermentation performances and aroma production of non-conventional wine yeasts are influenced by nitrogen preferences Stéphanie Rollero, Audrey Bloem, Anne Ortiz-Julien, Carole Camarasa, Benoit Divol FEMS Yeast Research , DOI: 10.1093/femsyr/foy055 First published online: 01 August 2018

Community-led comparative genomic and phenotypic analysis of the aquaculture pathogen Pseudomonas baetica a390T sequenced by Ion semiconductor and Nanopore technologies Ainsley Beaton, Cédric Lood, Edward Cunningham-Oakes, Alison MacFadyen, Alex J Mullins, Walid El Bestawy, João Botelho, Sylvie Chevalier, Shannon Coleman, Chloe Dalzell, Stephen K Dolan, Alberto Faccenda, Maarten G K Ghequire, Steven Higgins, Alexander Kutschera, Jordan Murray, Martha Redway, Talal Salih, Ana C da Silva, Brian A Smith, Nathan Smits, Ryan Thomson, Stuart Woodcock, Martin Welch, Pierre Cornelis, Rob Lavigne, Vera van Noort, Nicholas P Tucker FEMS Microbiology Letters , DOI: 10.1093/femsle/fny069 First published online: 01 May 2018

Antibiotic resistance phenotypes and virulence-associated genes in Escherichia coli isolated from animals and animal food products in Tunisia Souhir Badi, Paola Cremonesi, Mohamed Salah Abbassi, Chourouk Ibrahim, Majdi Snoussi, Giulia Bignoli, Mario Luini, Bianca Castiglioni, Abdennaceur Hassen FEMS Microbiology Letters , DOI: 10.1093/femsle/fny088 First published online: 01 May 2018

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